NLM DIR Seminar Schedule
UPCOMING SEMINARS
RECENT SEMINARS
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Dec. 17, 2024 Joey Thole
Training set associations drive AlphaFold initial predictions of fold-switching proteins -
Dec. 10, 2024 Amr Elsawy
AI for Age-Related Macular Degeneration on Optical Coherence Tomography -
Dec. 3, 2024 Sarvesh Soni
Toward Relieving Clinician Burden by Automatically Generating Progress Notes -
Nov. 19, 2024 Benjamin Lee
Reiterative Translation in Stop-Free Circular RNAs -
Nov. 12, 2024 Devlina Chakravarty
Fold-switching reveals blind spots in AlphaFold predictions
Scheduled Seminars on Nov. 16, 2021
Contact NLMDIRSeminarScheduling@mail.nih.gov with questions about this seminar.
Abstract:
Ribosomal RNA methylation is one of the main mechanisms of bacterial resistance to ribosome-targeting antibiotics. Methylation-dependent resistance has been described in drug-producing strains where resistance methyltransferases (MTs) are often encoded in the corresponding antibiotic biosynthetic gene clusters. It also has been found in pathogenic bacteria where this acquired resistance represents a significant medical problem. Several rRNA-specific MTs involved in antibiotic resistance have been identified and characterized. In this talk, I will present genomic and phylogenetic analyses of eight MT families involved in resistance to various classes of ribosome-targeting antibiotics. These include MTs conferring resistance to aminoglycosides, orthosomycins, RiPP thiopeptides, and macrolides. Within each family, subfamilies with antibiotic-resistance MTs were identified and their gene neighborhoods analyzed. I will discuss findings pointing to a great variability of genomic context for these MTs, as well as potential functional redundancy, overlapping of functions and possible dual housekeeping and antibiotic resistance function MTs.