NLM DIR Seminar Schedule
UPCOMING SEMINARS
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July 3, 2025 Matthew Diller
Using Ontologies to Make Knowledge Computable -
July 15, 2025 Noam Rotenberg
Cell phenotypes in the biomedical literature: a systematic analysis and the NLM CellLink text mining corpus
RECENT SEMINARS
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July 1, 2025 Yoshitaka Inoue
Graph-Aware Interpretable Drug Response Prediction and LLM-Driven Multi-Agent Drug-Target Interaction Prediction -
June 10, 2025 Aleksandra Foerster
Interactions at pre-bonding distances and bond formation for open p-shell atoms: a step toward biomolecular interaction modeling using electrostatics -
June 3, 2025 MG Hirsch
Interactions among subclones and immunity controls melanoma progression -
May 29, 2025 Harutyun Sahakyan
In silico evolution of globular protein folds from random sequences -
May 20, 2025 Ajith Pankajam
A roadmap from single cell to knowledge graph
Scheduled Seminars on June 20, 2023
Contact NLMDIRSeminarScheduling@mail.nih.gov with questions about this seminar.
Abstract:
The spin chain interacting systems have applications in various biological systems. The simplest spin interaction model - Ising model has been used in study of network states in the neural population, the spread of covid-19, development of cancer models, and even in financial markets and social sciences. We show that a generalization of the Ising model - quantum anisotropic XY model spin chains can be solved in periodic and open boundary conditions with arbitrary site lengths. The Hamiltonian with spin operators are converted to fermionic raising and lowering operators followed by Jordan-Wigner transformation. We discern the fermion parity e^[iπN] = (−1)^N in the boundary term in the periodic chain carefully to derive the ground state and excited state energy and their degeneracies. The periodic case was diagonalized by the Bogoliubov transformation; while the open boundary case is solved by matrix analysis with recursive relations. We present the expression of ground state energy. The even number sites have no degeneracy; while the odd number site chains have 4-fold degeneracy. For the open chain, the odd number chain can be expressed as a sum of analytical terms; while the fermionic energies have to be solved graphically. The degeneracy in the open chains is 2-fold degenerate with the odd number chains and no degeneracy with the even ones. The analytical form of the energy spectrum could potentially facilitate the simulations of the interacting systems.