NLM DIR Seminar Schedule
UPCOMING SEMINARS
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April 8, 2025 Jaya Srivastava
Leveraging a deep learning model to assess the impact of regulatory variants on traits and diseases -
April 15, 2025 Pascal Mutz
TBD -
April 18, 2025 Valentina Boeva, Department of Computer Science, ETH Zurich
Decoding tumor heterogeneity: computational methods for scRNA-seq and spatial omics -
April 22, 2025 Stanley Liang
TBD -
April 29, 2025 MG Hirsch
TBD
RECENT SEMINARS
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April 1, 2025 Roman Kogay
Horizontal transfer of bacterial operons into eukaryote genomes -
March 25, 2025 Yifan Yang
Adversarial Manipulation and Data Memorization in Large Language Models for Medicine -
March 11, 2025 Sofya Garushyants
Tmn – bacterial anti-phage defense system -
March 4, 2025 Sanasar Babajanyan
Evolution of antivirus defense in prokaryotes depending on the environmental virus load -
Feb. 25, 2025 Zhizheng Wang
GeneAgent: Self-verification Language Agent for Gene Set Analysis using Domain Databases
Scheduled Seminars on Jan. 28, 2025
In-person: Building 38A/B2N14 NCBI Library or Meeting Link
Contact NLMDIRSeminarScheduling@mail.nih.gov with questions about this seminar.
Abstract:
While bacteria have evolved a wide array of defense mechanisms in response to viral infections, viruses have developed counter-defense mechanisms to counter act these bacterial defense mechanisms. This never-ending dynamic occurs at a rapid pace and has led to a wide diversity of both bacteria and viruses. Genomic sequencing has enabled researchers to investigate a wide range of biological questions which could not be previously studied. As this technology improved in both performance and price, the overall amount of data available to researchers has skyrocketed. The emergence of metagenomic sequencing has revealed previously unknown biological diversity as well as provided a methodology to easily recover both virial and bacterial genomes. The combination of both the large amounts of data available and the ability to obtain both the genomic sequences off both bacteria and viruses within a given environment, enables the characterization of both the bacterial defense systems (defensome) and the viruses (virome) present within a given environment at an unprecedented scale. The investigation into virome and defensome elements which co-occur across a wide range of environments provides an increased understanding of the dynamics between bacteria and viruses.